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importKerasLayers

Import layers from Keras network

Description

example

layers= importKerasLayers(modelfile)imports the layers of a TensorFlow™-Keras network from a model file. The function returns the layers defined in the HDF5 (.h5) or JSON (.json) file given by the file namemodelfile.

This function requires theDeep Learning Toolbox™ Converter for TensorFlow Modelssupport package. If this support package is not installed, then the function provides a download link.

example

layers= importKerasLayers(modelfile,Name,Value)imports the layers from a TensorFlow-Keras network with additional options specified by one or more name-value pair arguments.

For example,importKerasLayers(modelfile,'ImportWeights',true)imports the network layers and the weights from the model filemodelfile.

Examples

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Download and install the Deep Learning Toolbox Converter for TensorFlow Models support package.

TypeimportKerasLayersat the command line.

importKerasLayers

If the Deep Learning Toolbox Converter for TensorFlow Models support package is not installed, then the function provides a link to the required support package in the Add-On Explorer. To install the support package, click the link, and then clickInstall. Check that the installation is successful by importing the layers from the model file'digitsDAGnet.h5'at the command line. If the required support package is installed, then the function returns aLayerGraphobject.

modelfile ='digitsDAGnet.h5'; net = importKerasLayers(modelfile)
net = LayerGraph with properties: Layers: [13x1 nnet.cnn.layer.Layer] Connections: [13x2 table] InputNames: {'input_1'} OutputNames: {'ClassificationLayer_activation_1'}

Import the network layers from the model filedigitsDAGnet.h5.

modelfile ='digitsDAGnet.h5'; layers = importKerasLayers(modelfile)
layers = LayerGraph with properties: Layers: [13x1 nnet.cnn.layer.Layer] Connections: [13x2 table] InputNames: {'input_1'} OutputNames: {'ClassificationLayer_activation_1'}

Plot the network architecture.

plot(layers)

Figure contains an axes object. The axes object contains an object of type graphplot.

Specify the network file to import.

modelfile ='digitsDAGnet.h5';

Import network layers.

layers = importKerasLayers(modelfile)
layers = LayerGraph with properties: Layers: [13x1 nnet.cnn.layer.Layer] Connections: [13x2 table] InputNames: {'input_1'} OutputNames: {'ClassificationLayer_activation_1'}

Load a data set for training a classifier to recognize new digits.

folder = fullfile(toolboxdir('nnet'),'nndemos','nndatasets','DigitDataset'); imds = imageDatastore(folder,...'IncludeSubfolders',true,...'LabelSource','foldernames');

Partition the dataset into training and test sets.

numTrainFiles = 750; [imdsTrain,imdsTest] = splitEachLabel(imds,numTrainFiles,'randomize');

Set the training options.

options = trainingOptions('sgdm',...'MaxEpochs',10,...'InitialLearnRate',0.001);

Train network using training data.

net = trainNetwork(imdsTrain,layers,options);
Training on single CPU. |========================================================================================| | Epoch | Iteration | Time Elapsed | Mini-batch | Mini-batch | Base Learning | | | | (hh:mm:ss) | Accuracy | Loss | Rate | |========================================================================================| | 1 | 1 | 00:00:01 | 15.62% | 12.6982 | 0.0010 | | 1 | 50 | 00:00:17 | 63.28% | 1.2109 | 0.0010 | | 2 | 100 | 00:00:34 | 85.16% | 0.4193 | 0.0010 | | 3 | 150 | 00:00:51 | 96.88% | 0.1749 | 0.0010 | | 4 | 200 | 00:01:06 | 99.22% | 0.0457 | 0.0010 | | 5 | 250 | 00:01:19 | 100.00% | 0.0374 | 0.0010 | | 6 | 300 | 00:01:34 | 96.88% | 0.1223 | 0.0010 | | 7 | 350 | 00:01:50 | 100.00% | 0.0087 | 0.0010 | | 7 | 400 | 00:02:04 | 100.00% | 0.0166 | 0.0010 | | 8 | 450 | 00:02:20 | 100.00% | 0.0098 | 0.0010 | | 9 | 500 | 00:02:38 | 100.00% | 0.0047 | 0.0010 | | 10 | 550 | 00:03:03 | 100.00% | 0.0031 | 0.0010 | | 10 | 580 | 00:03:13 | 100.00% | 0.0059 | 0.0010 | |========================================================================================| Training finished: Max epochs completed.

Run the trained network on the test set that was not used to train the network and predict the image labels (digits).

YPred = classify(net,imdsTest); YTest = imdsTest.Labels;

Calculate the accuracy.

accuracy = sum(YPred == YTest)/numel(YTest)
accuracy = 0.9856

Specify the network file to import layers and weights from.

modelfile ='digitsDAGnet.h5';

Import the network architecture and weights from the files you specified. To import the layer weights, specify'ImportWeights'to betrue. The function also imports the layers with their weights from the same HDF5 file.

layers = importKerasLayers(modelfile,'ImportWeights',true)
layers = LayerGraph with properties: Layers: [13x1 nnet.cnn.layer.Layer] Connections: [13x2 table] InputNames: {'input_1'} OutputNames: {'ClassificationLayer_activation_1'}

View the size of the weights in the second layer.

weights = layers.Layers(2).Weights; size(weights)
ans =1×47 7 1 20

The function has imported the weights so the layer weights are non-empty.

Specify the network file to import layers from and the file containing weights.

modelfile ='digitsDAGnet.json'; weights ='digitsDAGnet.weights.h5';

Import the network architecture and weights from the files you specified. The .json file does not include an output layer. Specify the output layer, so that importKerasLayers adds an output layer at the end of the networks architecture.

layers = importKerasLayers(modelfile,...'ImportWeights',true,...'WeightFile',weights,...'OutputLayerType','classification')
layers = LayerGraph with properties: Layers: [13x1 nnet.cnn.layer.Layer] Connections: [13x2 table] InputNames: {'input_1'} OutputNames: {'ClassificationLayer_activation_1'}

This example shows how to import the layers from a pretrained Keras network, replace the unsupported layers with custom layers, and assemble the layers into a network ready for prediction.

Import Keras Network

Import the layers from a Keras network model. The network in'digitsDAGnetwithnoise.h5'classifies images of digits.

filename ='digitsDAGnetwithnoise.h5'; lgraph = importKerasLayers(filename,'ImportWeights',true);
Warning: Unable to import some Keras layers, because they are not supported by the Deep Learning Toolbox. They have been replaced by placeholder layers. To find these layers, call the function findPlaceholderLayers on the returned object.

The Keras network contains some layers that are not supported by Deep Learning Toolbox. TheimportKerasLayersfunction displays a warning and replaces the unsupported layers with placeholder layers.

Plot the layer graph usingplot.

figure plot(lgraph) title("Imported Network")

Figure contains an axes object. The axes object with title Imported Network contains an object of type graphplot.

Replace Placeholder Layers

To replace the placeholder layers, first identify the names of the layers to replace. Find the placeholder layers usingfindPlaceholderLayers.

placeholderLayers = findPlaceholderLayers(lgraph)
placeholderLayers = 2x1 PlaceholderLayer array with layers: 1 'gaussian_noise_1' PLACEHOLDER LAYER Placeholder for 'GaussianNoise' Keras layer 2 'gaussian_noise_2' PLACEHOLDER LAYER Placeholder for 'GaussianNoise' Keras layer

Display the Keras configurations of these layers.

placeholderLayers.KerasConfiguration
ans =struct with fields:trainable: 1 name: 'gaussian_noise_1' stddev: 1.5000
ans =struct with fields:trainable: 1 name: 'gaussian_noise_2' stddev: 0.7000

Define a custom Gaussian noise layer. To create this layer, save the filegaussianNoiseLayer.min the current folder. Then, create two Gaussian noise layers with the same configurations as the imported Keras layers.

gnLayer1 = gaussianNoiseLayer(1.5,'new_gaussian_noise_1'); gnLayer2 = gaussianNoiseLayer(0.7,'new_gaussian_noise_2');

Replace the placeholder layers with the custom layers usingreplaceLayer.

lgraph = replaceLayer(lgraph,'gaussian_noise_1',gnLayer1); lgraph = replaceLayer(lgraph,'gaussian_noise_2',gnLayer2);

Plot the updated layer graph usingplot.

figure plot(lgraph) title("Network with Replaced Layers")

Figure contains an axes object. The axes object with title Network with Replaced Layers contains an object of type graphplot.

Specify Class Names

If the imported classification layer does not contain the classes, then you must specify these before prediction. If you do not specify the classes, then the software automatically sets the classes to1,2, ...,N, whereNis the number of classes.

Find the index of the classification layer by viewing theLayersproperty of the layer graph.

lgraph.Layers
ans = 15x1 Layer array with layers: 1 'input_1' Image Input 28x28x1 images 2 'conv2d_1' Convolution 20 7x7x1 convolutions with stride [1 1] and padding 'same' 3 'conv2d_1_relu' ReLU ReLU 4 'conv2d_2' Convolution 20 3x3x1 convolutions with stride [1 1] and padding 'same' 5 'conv2d_2_relu' ReLU ReLU 6 'new_gaussian_noise_1' Gaussian Noise Gaussian noise with standard deviation 1.5 7 'new_gaussian_noise_2' Gaussian Noise Gaussian noise with standard deviation 0.7 8 'max_pooling2d_1' Max Pooling 2x2 max pooling with stride [2 2] and padding 'same' 9 'max_pooling2d_2' Max Pooling 2x2 max pooling with stride [2 2] and padding 'same' 10 'flatten_1' Keras Flatten Flatten activations into 1-D assuming C-style (row-major) order 11 'flatten_2' Keras Flatten Flatten activations into 1-D assuming C-style (row-major) order 12 'concatenate_1' Depth concatenation Depth concatenation of 2 inputs 13 'dense_1' Fully Connected 10 fully connected layer 14 'activation_1' Softmax softmax 15 'ClassificationLayer_activation_1' Classification Output crossentropyex

The classification layer has the name'ClassificationLayer_activation_1'. View the classification layer and check theClassesproperty.

cLayer = lgraph.Layers(end)
cLayer = ClassificationOutputLayer with properties: Name: 'ClassificationLayer_activation_1' Classes: 'auto' ClassWeights: 'none' OutputSize: 'auto' Hyperparameters LossFunction: 'crossentropyex'

Because theClassesproperty of the layer is'auto', you must specify the classes manually. Set the classes to0,1, ...,9, and then replace the imported classification layer with the new one.

cLayer.Classes = string(0:9)
cLayer = ClassificationOutputLayer with properties: Name: 'ClassificationLayer_activation_1' Classes: [0 1 2 3 4 5 6 7 8 9] ClassWeights: 'none' OutputSize: 10 Hyperparameters LossFunction: 'crossentropyex'
lgraph = replaceLayer(lgraph,'ClassificationLayer_activation_1',cLayer);

Assemble Network

Assemble the layer graph usingassembleNetwork. The function returns aDAGNetworkobject that is ready to use for prediction.

net = assembleNetwork(lgraph)
net = DAGNetwork with properties: Layers: [15x1 nnet.cnn.layer.Layer] Connections: [15x2 table] InputNames: {'input_1'} OutputNames: {'ClassificationLayer_activation_1'}

Import layers from a Keras network that has parametric rectified linear unit (PReLU) layers.

A PReLU layer performs a threshold operation, where for each channel, any input value less than zero is multiplied by a scalar. The PReLU operation is given by

f ( x i ) = { x i if x i > 0 a i x i if x i 0

where x i is the input of the nonlinear activation f on channel i , and a i is the scaling parameter controlling the slope of the negative part. The subscript i in a i indicates that the parameter can be a vector and the nonlinear activation can vary on different channels.

importKerasNetworkandimportKerasLayerscan import a network that includes PReLU layers. These functions support both scalar-valued and vector-valued scaling parameters. If a scaling parameter is a vector, then the functions replace the vector with the average of the vector elements. You can modify a PReLU layer to have a vector-valued scaling parameter after import.

Specify the network file to import.

modelfile =“digitsDAGnetwithPReLU.h5';

digitsDAGnetwithPReLUincludes two PReLU layers. One has a scalar-valued scaling parameter, and the other has a vector-valued scaling parameter.

Import the network architecture and weights frommodelfile.

layers = importKerasLayers(modelfile,'ImportWeights',true);
Warning: Layer 'p_re_lu_1' is a PReLU layer with a vector-valued parameter. The function replaces the parameter with the average of the vector elements. You can change the parameter back to a vector after import.

TheimportKerasLayersfunction displays a warning for the PReLu layerp_re_lu_1. The function replaces the vector-valued scaling parameter ofp_re_lu_1with the average of the vector elements. You can change the parameter back to a vector. First, find the index of the PReLU layer by viewing theLayersproperty.

layers.Layers
ans = 13x1 Layer array with layers: 1 'input_1' Image Input 28x28x1 images 2 'conv2d_1' Convolution 20 7x7x1 convolutions with stride [1 1] and padding 'same' 3 'conv2d_2' Convolution 20 3x3x1 convolutions with stride [1 1] and padding 'same' 4 'p_re_lu_1' PReLU PReLU layer 5 'p_re_lu_2' PReLU PReLU layer 6 'max_pooling2d_1' Max Pooling 2x2 max pooling with stride [2 2] and padding 'same' 7 'max_pooling2d_2' Max Pooling 2x2 max pooling with stride [2 2] and padding 'same' 8 'flatten_1' Keras Flatten Flatten activations into 1-D assuming C-style (row-major) order 9 'flatten_2' Keras Flatten Flatten activations into 1-D assuming C-style (row-major) order 10 'concatenate_1' Depth concatenation Depth concatenation of 2 inputs 11 'dense_1' Fully Connected 10 fully connected layer 12 'dense_1_softmax' Softmax softmax 13 'ClassificationLayer_dense_1' Classification Output crossentropyex

layershas two PReLU layers. Extract the fourth layerp_re_lu_1,最初向量值扩展标准ameter for a channel dimension.

tempLayer = layers.Layers(4)
tempLayer = PreluLayer with properties: Name: 'p_re_lu_1' RawAlpha: [20x1 single] Learnable Parameters Alpha: 0.0044 State Parameters No properties. Show all properties

TheRawAlphaproperty contains the vector-valued scaling parameter, and theAlphaproperty contains a scalar that is an element average of the vector values. ReshapeRawAlphato place the vector values in the third dimension, which corresponds to the channel dimension. Then, replaceAlphawith the reshapedRawAlphavalues.

tempLayer.Alpha = reshape(tempLayer.RawAlpha,[1,1,numel(tempLayer.RawAlpha)])
tempLayer = PreluLayer with properties: Name: 'p_re_lu_1' RawAlpha: [20x1 single] Learnable Parameters Alpha: [1x1x20 single] State Parameters No properties. Show all properties

Replace thep_re_lu_1layer inlayerswithtempLayer.

layers = replaceLayer(layers,'p_re_lu_1', tempLayer); layers.Layers(4)
ans = PreluLayer with properties: Name: 'p_re_lu_1' RawAlpha: [20x1 single] Learnable Parameters Alpha: [1x1x20 single] State Parameters No properties. Show all properties

Now thep_re_lu_1layer has a vector-valued scaling parameter.

Input Arguments

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包含网络拱模型文件的名称itecture, and possibly the weights, specified as a character vector or a string scalar. The file must be in the current folder, in a folder on the MATLAB®path, or you must include a full or relative path to the file.

Ifmodelfileincludes

  • The network architecture and weights, then it must be in HDF5 (.h5) format.

  • Only the network architecture, then it can be in HDF5 or JSON (.json) format.

Ifmodelfileincludes only the network architecture, then you can optionally supply the weights using the'ImportWeights'and'WeightFile'name-value pair arguments. If you supply the weights, then the weights file must be in HDF5 format.

Example:'digitsnet.h5'

Data Types:char|string

Name-Value Arguments

Specify optional comma-separated pairs ofName,Valuearguments.Nameis the argument name andValueis the corresponding value.Namemust appear inside quotes. You can specify several name and value pair arguments in any order asName1,Value1,...,NameN,ValueN.

Example:importKerasLayers(modelfile,'OutputLayerType','classification')imports the network layers from the model filemodelfileand adds an output layer for a classification problem at the end of the Keras layers.

Type of output layer that the function appends to the end of the imported network architecture whenmodelfiledoes not specify a loss function, specified as'classification','regression', or'pixelclassification'. Appending apixelClassificationLayer(Computer Vision Toolbox)object requires Computer Vision Toolbox™.

If a network inmodelfilehas multiple outputs, then you cannot specify the output layer types using this argument.importKerasLayersinserts placeholder layers for the outputs. After importing, you can find and replace the placeholder layers by usingfindPlaceholderLayersandreplaceLayer, respectively.

Example:'OutputLayerType','regression'

Size of the input images for the network, specified as a vector of two or three numerical values corresponding to[height,width]for grayscale images and[height,width,channels]for color images, respectively. The network uses this information when themodelfiledoes not specify the input size.

If a network inmodelfilehas multiple inputs, then you cannot specify the input sizes using this argument.importKerasLayersinserts placeholder layers for the inputs. After importing, you can find and replace the placeholder layers by usingfindPlaceholderLayersandreplaceLayer, respectively.

Example:'ImageInputSize',[28 28]

Indicator to import weights as well as the network architecture, specified as eitherfalseortrue.

  • If'ImportWeights'istrueandmodelfileincludes the weights, thenimportKerasLayersimports the weights frommodelfile, which must have HDF5 (.h5) format.

  • If'ImportWeights'istrueandmodelfiledoes not include the weights, then you must specify a separate file that includes weights, using the'WeightFile'name-value pair argument.

Example:'ImportWeights',true

Data Types:logical

Weight file name, from which to import weights whenmodelfiledoes not include weights, specified as a character vector or a string scalar. To use this name-value pair argument, you also must set'ImportWeights'totrue.

Weight file must be in the current folder, in a folder on the MATLAB path, or you must include a full or relative path to the file.

Example:'WeightFile','weights.h5'

Data Types:char|string

Output Arguments

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Network architecture, returned as aLayerarray object when the Keras network is of typeSequential, or returned as aLayerGraphobject when the Keras network is of typeModel.

Limitations

  • importKerasLayerssupports TensorFlow-Keras versions as follows:

    • The function fully supports TensorFlow-Keras versions up to 2.2.4.

    • The function offers limited support for TensorFlow-Keras versions 2.2.5 to 2.4.0.

More About

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Supported Keras Layers

importKerasLayerssupports the following TensorFlow-Keras layer types for conversion into built-in MATLAB layers, with some limitations.

TensorFlow-Keras Layer Corresponding Deep Learning Toolbox Layer
Add additionLayer

Activation,激活的名字:

  • 'elu'

  • 'relu'

  • 'linear'

  • 'softmax'

  • 'sigmoid'

  • 'swish'

  • 'tanh'

Layers:

Advanced activations:

  • ELU

  • Softmax

  • ReLU

  • LeakyReLU

  • PReLu*

Layers:

AveragePooling1D averagePooling1dLayerwithPaddingValuespecified as'mean'
AveragePooling2D averagePooling2dLayerwithPaddingValuespecified as'mean'
BatchNormalization batchNormalizationLayer
Bidirectional(LSTM(__)) bilstmLayer
Concatenate depthConcatenationLayer
Conv1D convolution1dLayer
Conv2D convolution2dLayer
Conv2DTranspose transposedConv2dLayer
CuDNNGRU gruLayer
CuDNNLSTM lstmLayer
Dense fullyConnectedLayer
DepthwiseConv2D groupedConvolution2dLayer
Dropout dropoutLayer
Embedding wordEmbeddingLayer(Text Analytics Toolbox)
Flatten nnet.keras.layer.FlattenCStyleLayer
GlobalAveragePooling1D globalAveragePooling1dLayer
GlobalAveragePooling2D globalAveragePooling2dLayer
GlobalMaxPool1D globalMaxPooling1dLayer
GlobalMaxPool2D globalMaxPooling2dLayer
GRU gruLayer
Input imageInputLayer,sequenceInputLayer, orfeatureInputLayer
LSTM lstmLayer
MaxPool1D maxPooling1dLayer
MaxPool2D maxPooling2dLayer
Multiply multiplicationLayer
SeparableConv2D groupedConvolution2dLayerorconvolution2dLayer
TimeDistributed sequenceFoldingLayerbefore the wrapped layer, andsequenceUnfoldingLayerafter the wrapped layer
UpSampling2D resize2dLayer(Image Processing Toolbox)
UpSampling3D resize3dLayer(Image Processing Toolbox)
ZeroPadding1D nnet.keras.layer.ZeroPadding1DLayer
ZeroPadding2D nnet.keras.layer.ZeroPadding2DLayer

* For a PReLU layer,importKerasLayersreplaces a vector-valued scaling parameter with the average of the vector elements. You can change the parameter back to a vector after import. For an example, seeImport Keras PReLU Layer.

Supported Keras Loss Functions

importKerasLayerssupports the following Keras loss functions:

  • mean_squared_error

  • categorical_crossentropy

  • sparse_categorical_crossentropy

  • binary_crossentropy

Use Imported Network Layers on GPU

importKerasLayersdoes not execute on a GPU. However,importKerasLayers进口pretrained层的神经网络for deep learning as aLayerarray orLayerGraph对象,它可以use on a GPU.

  • Convert the imported layers to aDAGNetworkobject by usingassembleNetwork. On theDAGNetworkobject, you can then predict class labels on either a CPU or GPU by usingclassify. Specify the hardware requirements using the name-value argumentExecutionEnvironment. For networks with multiple outputs, use thepredictfunction and specify the name-value argumentReturnCategoricalastrue.

  • Convert the importedLayerGraphobject to adlnetworkobject by usingdlnetwork. On thedlnetworkobject, you can then predict class labels on either a CPU or GPU by usingpredict. The functionpredictexecutes on the GPU if either the input data or network parameters are stored on the GPU.

    • If you useminibatchqueueto process and manage the mini-batches of input data, theminibatchqueueobject converts the output to a GPU array by default if a GPU is available.

    • Usedlupdateto convert the learnable parameters of adlnetworkobject to GPU arrays.

      dlnet = dlupdate(@gpuarray,dlnet)

  • You can train the imported layers on either a CPU or GPU by usingtrainNetwork. To specify training options, including options for the execution environment, use thetrainingOptionsfunction. Specify the hardware requirements using the name-value argumentExecutionEnvironment. For more information on how to accelerate training, seeScale Up Deep Learning in Parallel, on GPUs, and in the Cloud.

Using a GPU requires Parallel Computing Toolbox™ and a supported GPU device. For information on supported devices, seeGPU Support by Release(Parallel Computing Toolbox).

Tips

  • If the network contains a layer thatDeep Learning Toolbox Converter for TensorFlow Modelsdoes not support (seeSupported Keras Layers), thenimportKerasLayersinserts a placeholder layer in place of the unsupported layer. To find the names and indices of the unsupported layers in the network, use thefindPlaceholderLayersfunction. You then can replace a placeholder layer with a new layer that you define. To replace a layer, usereplaceLayer.

  • You can replace a placeholder layer with a new layer that you define.

  • You can import a Keras network with multiple inputs and multiple outputs (MIMO). UseimportKerasNetworkif the network includes input size information for the inputs and loss information for the outputs. Otherwise, useimportKerasLayers. TheimportKerasLayersfunction inserts placeholder layers for the inputs and outputs. After importing, you can find and replace the placeholder layers by usingfindPlaceholderLayersandreplaceLayer, respectively. The workflow for importing MIMO Keras networks is the same as the workflow for importing MIMO ONNX™ networks. For an example, seeImport and Assemble ONNX Network with Multiple Outputs. To learn about a deep learning network with multiple inputs and multiple outputs, seeMultiple-Input and Multiple-Output Networks.

  • To use a pretrained network for prediction or transfer learning on new images, you must preprocess your images in the same way the images that were used to train the imported model were preprocessed. The most common preprocessing steps are resizing images, subtracting image average values, and converting the images from BGR images to RGB.

    • To resize images, useimresize. For example,imresize(image,[227,227,3]).

    • To convert images from RGB to BGR format, useflip. For example,flip(image,3).

    For more information on preprocessing images for training and prediction, seePreprocess Images for Deep Learning.

Alternative Functionality

  • UseimportKerasNetworkorimportKerasLayersto import a TensorFlow-Keras network in HDF5 or JSON format. If the TensorFlow network is in the saved model format, useimportTensorFlowNetworkorimportTensorFlowLayers.

  • If you import a custom TensorFlow-Keras layer or if the software cannot convert a TensorFlow-Keras layer into an equivalent built-in MATLAB layer, you can useimportTensorFlowNetworkorimportTensorFlowLayers, which try to generate a custom layer. For example,importTensorFlowNetworkandimportTensorFlowLayersgenerate a custom layer when you import a TensorFlow-KerasLambdalayer.

References

[1]Keras: Python深度学习库.https://keras.io.

Introduced in R2017b